Citation and Citations

How to Cite

If you use LoFreq, please cite the following paper:

Wilm et al. LoFreq: A sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets. Nucleic Acids Res. 2012; 40(22):11189-201.

LoFreq in action, media mentions etc.

• LoFreq has been used in a number of studies. See this full list of publications citing LoFreq (via Google Scholar).
• Pacific Biosciences’ minor variants calling protocol is based on LoFreq
• Press coverage:
  • Official A-Star press release
  • Featured Research of Science Daily: Scientists catch evolving germs and cancer cells early
  • Asian Scientist: Watching Evolution in Real-Time
  • Medical Xpress: Computer program identifies rare mutations harbored within diverse populations of cancer cells and microorganisms